This Cottage Cheese Flatbread Pizza Margherita is not just another keto recipe—it’s a culinary masterpiece that combines simplicity with gourmet flair. Perfect for those who crave the classic Margherita flavors but want to keep it low-carb and high-protein. Let’s dive into this delicious adventure!
This low-carb pizza recipe uses only simple ingredients. It’s keto, gluten-free, low-carb, grain-free and great source of protein. Perfect for a quick lunch or dinner!
This low-carb pizza crust is based on my very popular original recipe for viral cottage cheese flatbread recipe! I wanted something simple yet delicious that could satisfy my pizza cravings without the guilt.
With just cottage cheese and eggs, this crust is not only easy to make but also packed with protein. It’s become a staple in my meal prep routine, and I can’t wait for you to try it!
You can even make two at once and/or make ahead and store in the fridge and add toppings later. It stores in the fridge great too as a meal prep if you want to make and store. Lots of options.
If you’d like to see how I made this recipe, check out my quick YouTube video for helpful process shots and tips!
Ingredients
Pizza Crust Main Ingredients:
- full-fat cottage cheese
- whole eggs (room temperature)
Optional:
- onion powder
- garlic powder
- bagel seasoning
- Italian seasoning
Toppings Idea:
- fresh mozzarella cheese
- tomato sauce (swaps: pizza sauce or sugar-free marinara sauce)
- basil leaves

Instructions
Blend the Ingredients: Add all pizza crust ingredients (cottage cheese, eggs, garlic powder, and Italian seasoning) into a immersion blender or food processor. Blend until smooth and creamy texture. This process improves the texture of the cottage cheese mixture.
Prepare the Baking Tray: Pour the mixture (pizza dough) onto a pizza tray or prepared baking sheet (lined with greaseproof paper or a piece of parchment paper). If using parchment paper, spray it with cooking spray to prevent sticking.
Bake the Crust: Cook the pizza base in a preheated oven at 400°F (200°C) for 7-10 minutes, or until it starts to turn golden brown.
Add Toppings: Remove the cottage cheese pizza crust from the oven and arrange your favorite toppings. Spread the tomato sauce, place slices of fresh mozzarella cheese, and add basil leaves.
Final Bake: Return the pizza to the oven and cook for another 5-7 minutes, or until the cheese is melted and bubbly.
Serve and Enjoy: Let the pizza cool for a few minutes before slicing. Enjoy your delicious, high-protein, low-carb pizza!

This Cottage Cheese Flatbread Pizza Margherita is a fantastic option for anyone on a keto or low-carb diet. With just cottage cheese and eggs, you get a delicious, high-protein, low-carb pizza that’s perfect for satisfying your pizza cravings without the guilt. It’s quick, easy, and uses simple ingredients you probably already have at home. Whether it’s for a quick lunch or dinner, this recipe is sure to become a staple in your meal prep routine. Give it a try and enjoy the best keto pizza you’ve ever had!

FAQ
Q: Can I use fat-free cottage cheese? A: Yes, fat-free cottage cheese works well and keeps the crust low in fat.
Q: How do I store leftovers? A: Store any leftover pizza in an airtight container in the fridge for up to 3 days. Reheat in the oven or microwave for best results.
Q: Can I make this crust ahead of time? A: Absolutely! You can prepare the crust and store it in the fridge. When ready to eat, just add your toppings and bake.
Q: Can I add parmesan cheese to the crust? A: Absolutely! Adding parmesan cheese to the crust can enhance the flavor and add a nice crispiness. It’s a great alternative to traditional bread.
Q: Can I cook this in an air fryer? A: Yes, you can cook the crust in an air fryer. Adjust the cooking time for a golden brown color.
Q: Can I use egg whites instead of whole eggs? A: Yes, you can use egg whites if you prefer. However, using whole eggs gives the crust a better texture and nutritional value.

P.S. If you’re craving more savory ideas, don’t miss my 15+ Savory Cottage Cheese Recipes You Have to Try (High Protein) for even more delicious low-carb inspiration!
More Keto Easy Recipes To Try
More Keto Pizza Recipes
- Keto High Protein Cottage Cheese Pepperoni Pizza
- Keto Pizza with Pepperoni and Pesto Sauce
- Cottage Cheese Pizza Bowl with Pepperoni
- Pepperoni Keto Pizza with Pesto Sauce
More High Protein Low Carb Cottage Cheese Recipes:
- My Best Selection of High Protein Low Carb Cottage Cheese Low Carb Recipes
- Cottage Cheese Egg Muffins with Pancetta: Low Carb Recipe
- Whipped Cottage Cheese Blueberry Ice Cream Recipe
Keto Bread Recipes
- 2-Ingredient Cottage Cheese Bread Recipe.
- Easiest Cottage Cheese Bread with Almond Flour Keto Recipe
- 2 Ingredient Cottage Cheese Flatbread
Cottage Cheese Flatbread Pizza Margherita
Ingredients
Keto Pizza Crust
- 1 cup cottage cheese full fat
- 2 eggs room temperature, whole
Optional
- 1 teaspoon garlic powder
- 1 teaspoon Italian seasoning
Toppings
- 1/2 cup pizza sauce swaps: pizza sauce or sugar-free marinara sauce
- 4.4 oz Mozzarella cheese fresh
- 12 basil leaves fresh
Instructions
- Add all pizza crust ingredients (cottage cheese, eggs, garlic powder, and Italian seasoning) into a immersion blender or food processor. Blend until smooth and creamy texture. This process improves the texture of the cottage cheese mixture.
- Pour the mixture (pizza dough) onto a pizza tray or prepared baking sheet (lined with greaseproof paper or a piece of parchment paper). If using parchment paper, spray it with cooking spray to prevent sticking.
- Cook the pizza base in a preheated oven at 400°F (200°C) for 7-10 minutes, or until it starts to turn golden brown.
- Remove the cottage cheese pizza crust from the oven and arrange your favorite toppings. Spread the tomato sauce, place slices of fresh mozzarella cheese, and add basil leaves.
- Return the pizza to the oven and cook for another 5-7 minutes, or until the cheese is melted and bubbly.
YouTube Video
Notes
- Can I use fat-free cottage cheese? Yes, fat-free cottage cheese works well and keeps the crust low in fat.
- How do I store leftovers? Store any leftover pizza in an airtight container in the fridge for up to 3 days. Reheat in the oven or microwave for best results.
- Check the FAQ sections for more cooking ideas.
This worked exactly as written, thanks!