If creamy enchiladas and flavorful chicken gyros had a delicious low carb baby… this would be it. My Keto Chicken Gyros Enchiladas Casserole is a Greek-Mexican fusion dish made with tender shredded chicken gyros, tangy marinara sauce, cheesy goodness, and keto-friendly tortillas, baked to golden perfection in your favorite casserole dish.
Golden, melty, and packed with Greek-inspired flavor, this keto chicken enchilada casserole brings the zing of gyros and the comfort of Mexican food into one ridiculously satisfying dinner. Think warm seasoned chicken, tender onions, a swirl of tomato sauce, and a bubbling cheesy top, all wrapped up in soft cottage cheese wraps you can roll or layer like a casserole.
This keto enchiladas recipe swaps traditional corn tortillas for high-protein cottage cheese wraps and delivers the cozy comfort of a low carb chicken enchilada casserole but with a twist of Mediterranean flavor.
Each serving contains 445.8 calories, 11.2g net carbs, 46.6g protein, and 21.1g fat.

Why You’ll Love This Recipe
- Packed with the flavors of enchiladas but with a Greek twist
- Uses homemade shredded chicken gyros for rich, marinated taste
- Baked in a casserole dish for hands-off cooking
- Loaded with cheddar cheese, but easily customizable
- Ready in 30 minutes and perfect for keto meal prep
Ingredients
- Chicken gyros meat (made from chicken breast) – savory, high-protein filling (use my chicken gyros recipe)
- Onion, sliced – adds sweetness and depth
- Homemade marinara sauce – light tomato flavor with garlic and herbs
- Cheddar cheese (or mozzarella) – melty topping and cheesy filling
- Keto cottage cheese wraps – tender and foldable, no flour needed (use my 2-ingredient cottage cheese wraps)

Instructions
- Preheat your oven to 375°F (190°C).
- Prepare the chicken gyros by following this recipe using 1 chicken breast. If using leftover chicken gyros, reheat them gently in a skillet.
- Add the onion strips to the pan and sauté until softened and golden.
- Lightly grease a baking dish and spread 1–2 tablespoons of marinara across the bottom.
- On a plate, assemble each wrap:
- Spread a bit of marinara
- Add onion and chicken mixture
- Sprinkle the top of the chicken with cheese
- Roll tightly
- Place wraps seam-side down in the dish. Pour remaining marinara over the top and sprinkle with remaining cheese.
- Bake for 12–15 minutes until the top is melty and golden brown.
- Serve hot with a side of sour cream or tzatziki.
Air fryer method: 375°F for 10 minutes.

Expert Tips for Perfect Keto Enchilada
- Use a large bowl to mix your filling ingredients if batching.
- Add cream cheese to the filling for a creamy texture.
- Swap in rotisserie chicken if you’re short on time.
- Sprinkle with taco seasoning or black pepper to boost flavor.
- Store leftovers in an airtight container for up to 4 days.
Ingredient Swaps
- Shredded Mexican cheese blend, monterey jack cheese or pepper jack cheese for a kick
- Replace wraps with low carb tortillas from the grocery store
- Use green chiles or chili powder in the filling for a more traditional enchilada flavor
- Sub olive oil for sautéing instead of butter
- Use keto-friendly enchilada sauce instead of the marinara sauce
- Swap the chicken breast with chicken thighs

Storage Tips
- Fridge: Up to 4 days in an airtight container
- Freezer: Wrap portions tightly in foil or plastic wrap and freeze up to 2 months
- Reheat: Use oven, air fryer, or microwave (covered with paper towels)
What to Serve With
This Greek-style keto enchilada casserole pairs perfectly with cool, creamy sides and simple low-carb veggies.
- Keto Tzatziki Sauce – Greek Yogurt Version
- Simple Roasted Cauliflower Broccoli Keto Side – Roasty, toasty, and effortless. This warm veggie mix adds bulk and crunch.
- Keto Mediterranean Cauliflower Rice – When you want that rice feel without the carbs. Herby, fluffy, and fast.
Conclusion
This High Protein Low Carb Keto Chicken Enchiladas Casserole is a cozy, fusion dinner that brings together two amazing cuisines—Greek and Mexican—into one perfect low-carb bake. Whether you serve it rolled or sliced, it’s full of comfort, flavor, and cheesy goodness.
Tried it? Let me know how you served it—rolled, cut up like casserole, or loaded with extra toppings. Tag me on Pinterest or share your version in my Facebook group!

More Keto Recipes to Try
- 2-Ingredient Cottage Cheese Wraps
- Keto Chicken Gyros with Cottage Cheese
- Keto Chicken Gyro Casserole
- Keto Mediterranean Burgers
- Mediterranean Keto Chicken Wraps – Ranch Style
- Keto Tomato Basil Olives Cottage Cheese Bread
FAQ
Can I skip the wrap rolling and layer it like a casserole?
Yes! Just layer like lasagna – sauce, wrap pieces, chicken, onions, cheese, repeat.
Can I use cream cheese instead of cheddar?
Yes, add a tablespoon to each wrap for extra creaminess and flavor.
Is this freezer-friendly?
Totally! Wrap portions tightly and freeze for up to 2 months.
Can I use rotisserie or shredded chicken instead of gyros?
Absolutely! Just season with taco seasoning or cumin to mimic the gyro flavor.
What’s the net carb count for this keto enchilada recipe?
Each serving has just 11.2g net carbs, including the keto wraps and sauce.

Keto Chicken Gyros Enchiladas Casserole
Equipment
Ingredients
- 8 oz keto chicken gyros use 1 of my chicken gyros recipe
- 1 onion sliced into strips
- 1/4 cup marinara sauce with garlic and Italian herbs
- 1/2 cup shredded cheddar cheese or mozzarella
- 4 small keto wraps use my 2-ingredient cottage cheese wraps
Instructions
- Preheat your oven to 375°F (190°C).
- Prepare the chicken gyros by following this recipe using 1 chicken breast. If using leftover chicken gyros, reheat them gently in a skillet.8 oz keto chicken gyros
- Add the sliced onion to the same pan and sauté until soft and slightly golden, about 5 minutes.1 onion
- Lightly grease a casserole dish and spread 1–2 tablespoons of marinara sauce across the bottom to prevent sticking.1/4 cup marinara sauce
- Asseble the wraps: Brush with a bit of marinara. Add chicken and onions. Sprinkle with a bit of cheese. Roll tightly and place seam-side down in the dish8 oz keto chicken gyros, 1 onion, 1/4 cup marinara sauce, 1/2 cup shredded cheddar cheese, 4 small keto wraps
- Repeat with remaining wraps until the casserole dish is full.
- Top with remaining marinara sauce and sprinkle the rest of the shredded cheese evenly on top.
- Bake for 12–15 minutes, or until the cheese is melted and golden.
- Optional: For crispier edges, bake uncovered or finish in the air fryer for 2–3 minutes.
- Serve hot, topped with tzatziki, sour cream, or fresh herbs if desired.
Notes
- Make it a casserole-style dish: Not in the mood to roll the wraps? Just layer everything like lasagna! Spread sauce, torn wraps, chicken, onions, cheese, then repeat. Super cozy, super easy.
- Protein boost: Want even more protein? Add chopped boiled eggs inside the wraps or serve with a hard-boiled egg on the side.
- Cheese swaps: Mozzarella works great if you’re out of cheddar. You can even mix in a little cream cheese for a creamy texture.
- Spice it up: Add chili flakes or a pinch of cayenne if you like your enchiladas with a little kick!
Nutrition Per 1 (ONE) Serving
WANT EVEN MORE DELICIOUS RECIPES? Subscribe to my newsletter below. If you love simple keto recipes, please join my Facebook Community group or subscribe to my YouTube channel.
This chicken gyros enchilada casserole turned out so flavorful and satisfying! The combo of tender marinated chicken, melty cheese, and warm sauce is just comfort without guilt. It’s an easy meal-prep win and perfect for a busy weeknight dinner.